Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.82■■□□□ 1.4
Rpap2Q8VC34 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpap2Q8VC34 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpap2Q8VC34 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpap2Q8VC34 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpap2Q8VC34 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Rpap2Q8VC34 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.8■■□□□ 1.4
Rpap2Q8VC34 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpap2Q8VC34 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.79■■□□□ 1.4
Rpap2Q8VC34 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rpap2Q8VC34 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpap2Q8VC34 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpap2Q8VC34 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Rpap2Q8VC34 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rpap2Q8VC34 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.78■■□□□ 1.4
Rpap2Q8VC34 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.78■■□□□ 1.4
Rpap2Q8VC34 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rpap2Q8VC34 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpap2Q8VC34 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rpap2Q8VC34 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.76■■□□□ 1.39
Rpap2Q8VC34 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Rpap2Q8VC34 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Rpap2Q8VC34 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.75■■□□□ 1.39
Rpap2Q8VC34 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.74■■□□□ 1.39
Rpap2Q8VC34 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rpap2Q8VC34 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.74■■□□□ 1.39
Rpap2Q8VC34 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap2Q8VC34 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap2Q8VC34 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.72■■□□□ 1.39
Rpap2Q8VC34 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rpap2Q8VC34 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap2Q8VC34 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Rpap2Q8VC34 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap2Q8VC34 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap2Q8VC34 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.71■■□□□ 1.39
Rpap2Q8VC34 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap2Q8VC34 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.71■■□□□ 1.39
Rpap2Q8VC34 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rpap2Q8VC34 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap2Q8VC34 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap2Q8VC34 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.7■■□□□ 1.38
Rpap2Q8VC34 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.7■■□□□ 1.38
Rpap2Q8VC34 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap2Q8VC34 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap2Q8VC34 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.68■■□□□ 1.38
Rpap2Q8VC34 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap2Q8VC34 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap2Q8VC34 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap2Q8VC34 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Rpap2Q8VC34 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.67■■□□□ 1.38
Rpap2Q8VC34 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap2Q8VC34 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap2Q8VC34 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap2Q8VC34 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap2Q8VC34 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap2Q8VC34 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap2Q8VC34 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rpap2Q8VC34 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms