Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slf1Q8R3P9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slf1Q8R3P9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slf1Q8R3P9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slf1Q8R3P9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slf1Q8R3P9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slf1Q8R3P9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slf1Q8R3P9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.71■■□□□ 1.07
Slf1Q8R3P9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slf1Q8R3P9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slf1Q8R3P9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slf1Q8R3P9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slf1Q8R3P9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slf1Q8R3P9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Slf1Q8R3P9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slf1Q8R3P9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slf1Q8R3P9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slf1Q8R3P9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slf1Q8R3P9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slf1Q8R3P9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slf1Q8R3P9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slf1Q8R3P9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.65■■□□□ 1.06
Slf1Q8R3P9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slf1Q8R3P9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slf1Q8R3P9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slf1Q8R3P9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slf1Q8R3P9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.64■■□□□ 1.06
Slf1Q8R3P9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Slf1Q8R3P9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slf1Q8R3P9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.64■■□□□ 1.05
Slf1Q8R3P9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slf1Q8R3P9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slf1Q8R3P9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slf1Q8R3P9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Slf1Q8R3P9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
Slf1Q8R3P9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slf1Q8R3P9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slf1Q8R3P9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Slf1Q8R3P9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.59■■□□□ 1.05
Slf1Q8R3P9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slf1Q8R3P9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slf1Q8R3P9 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.59■■□□□ 1.05
Slf1Q8R3P9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slf1Q8R3P9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slf1Q8R3P9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Slf1Q8R3P9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Slf1Q8R3P9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Slf1Q8R3P9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.58■■□□□ 1.04
Slf1Q8R3P9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.58■■□□□ 1.04
Slf1Q8R3P9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slf1Q8R3P9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Slf1Q8R3P9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms