Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CipcQ8R0W1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CipcQ8R0W1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CipcQ8R0W1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CipcQ8R0W1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CipcQ8R0W1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CipcQ8R0W1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.28■□□□□ 0.84
CipcQ8R0W1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CipcQ8R0W1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CipcQ8R0W1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CipcQ8R0W1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CipcQ8R0W1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CipcQ8R0W1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CipcQ8R0W1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CipcQ8R0W1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CipcQ8R0W1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.26■□□□□ 0.83
CipcQ8R0W1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CipcQ8R0W1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
CipcQ8R0W1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CipcQ8R0W1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CipcQ8R0W1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CipcQ8R0W1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.24■□□□□ 0.83
CipcQ8R0W1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CipcQ8R0W1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CipcQ8R0W1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.22■□□□□ 0.83
CipcQ8R0W1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CipcQ8R0W1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Gm5812-201ENSMUST00000061073 957 ntBASIC20.22■□□□□ 0.83
CipcQ8R0W1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CipcQ8R0W1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
CipcQ8R0W1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CipcQ8R0W1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CipcQ8R0W1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.19■□□□□ 0.82
CipcQ8R0W1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CipcQ8R0W1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.19■□□□□ 0.82
CipcQ8R0W1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CipcQ8R0W1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CipcQ8R0W1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CipcQ8R0W1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CipcQ8R0W1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms