Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC29■■■□□ 2.23
Ddx54Q8K4L0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx54Q8K4L0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx54Q8K4L0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ddx54Q8K4L0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Ddx54Q8K4L0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx54Q8K4L0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.98■■■□□ 2.23
Ddx54Q8K4L0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx54Q8K4L0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx54Q8K4L0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ddx54Q8K4L0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC28.96■■■□□ 2.23
Ddx54Q8K4L0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Ddx54Q8K4L0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Ddx54Q8K4L0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Ddx54Q8K4L0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx54Q8K4L0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx54Q8K4L0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Ddx54Q8K4L0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC28.94■■■□□ 2.22
Ddx54Q8K4L0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 Gm8093-201ENSMUST00000128935 1892 ntBASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx54Q8K4L0 Gm28731-201ENSMUST00000185564 1569 ntBASIC28.92■■■□□ 2.22
Ddx54Q8K4L0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx54Q8K4L0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx54Q8K4L0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx54Q8K4L0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC28.91■■■□□ 2.22
Ddx54Q8K4L0 Gm2011-201ENSMUST00000203124 1263 ntBASIC28.91■■■□□ 2.22
Ddx54Q8K4L0 AC164629.5-201ENSMUST00000220387 632 ntBASIC28.91■■■□□ 2.22
Ddx54Q8K4L0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx54Q8K4L0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx54Q8K4L0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC28.89■■■□□ 2.22
Ddx54Q8K4L0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC28.89■■■□□ 2.22
Ddx54Q8K4L0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx54Q8K4L0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Spcs1-207ENSMUST00000228767 1008 ntBASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx54Q8K4L0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.87■■■□□ 2.21
Ddx54Q8K4L0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx54Q8K4L0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx54Q8K4L0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC28.86■■■□□ 2.21
Ddx54Q8K4L0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx54Q8K4L0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx54Q8K4L0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx54Q8K4L0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC28.84■■■□□ 2.21
Ddx54Q8K4L0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx54Q8K4L0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC28.83■■■□□ 2.21
Ddx54Q8K4L0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Gm9207-201ENSMUST00000198773 1115 ntBASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx54Q8K4L0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Ddx54Q8K4L0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx54Q8K4L0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx54Q8K4L0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Ddx54Q8K4L0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC28.8■■■□□ 2.2
Ddx54Q8K4L0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC28.79■■■□□ 2.2
Ddx54Q8K4L0 Gm6139-201ENSMUST00000079261 882 ntBASIC28.79■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms