Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Gm45417-201ENSMUST00000209533 758 ntBASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shtn1Q8K2Q9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shtn1Q8K2Q9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.66■■□□□ 1.7
Shtn1Q8K2Q9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shtn1Q8K2Q9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Shtn1Q8K2Q9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shtn1Q8K2Q9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Shtn1Q8K2Q9 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.65■■□□□ 1.7
Shtn1Q8K2Q9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Shtn1Q8K2Q9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shtn1Q8K2Q9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shtn1Q8K2Q9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shtn1Q8K2Q9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shtn1Q8K2Q9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shtn1Q8K2Q9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Shtn1Q8K2Q9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Shtn1Q8K2Q9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shtn1Q8K2Q9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shtn1Q8K2Q9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shtn1Q8K2Q9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Shtn1Q8K2Q9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Shtn1Q8K2Q9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shtn1Q8K2Q9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shtn1Q8K2Q9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.61■■□□□ 1.69
Shtn1Q8K2Q9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shtn1Q8K2Q9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shtn1Q8K2Q9 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.6■■□□□ 1.69
Shtn1Q8K2Q9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shtn1Q8K2Q9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shtn1Q8K2Q9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.6■■□□□ 1.69
Shtn1Q8K2Q9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shtn1Q8K2Q9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shtn1Q8K2Q9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shtn1Q8K2Q9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.59■■□□□ 1.69
Shtn1Q8K2Q9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shtn1Q8K2Q9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Shtn1Q8K2Q9 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.58■■□□□ 1.69
Shtn1Q8K2Q9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Shtn1Q8K2Q9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
Shtn1Q8K2Q9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Shtn1Q8K2Q9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Shtn1Q8K2Q9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shtn1Q8K2Q9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shtn1Q8K2Q9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shtn1Q8K2Q9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Shtn1Q8K2Q9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.57■■□□□ 1.68
Shtn1Q8K2Q9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Gm12821-201ENSMUST00000120022 600 ntBASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shtn1Q8K2Q9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shtn1Q8K2Q9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shtn1Q8K2Q9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Shtn1Q8K2Q9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.54■■□□□ 1.68
Shtn1Q8K2Q9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shtn1Q8K2Q9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.54■■□□□ 1.68
Shtn1Q8K2Q9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Shtn1Q8K2Q9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Shtn1Q8K2Q9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Shtn1Q8K2Q9 Gm10399-202ENSMUST00000202768 748 ntBASIC25.53■■□□□ 1.68
Shtn1Q8K2Q9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Shtn1Q8K2Q9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Shtn1Q8K2Q9 Slc35b2-207ENSMUST00000226086 850 ntBASIC25.52■■□□□ 1.68
Shtn1Q8K2Q9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Shtn1Q8K2Q9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Shtn1Q8K2Q9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Shtn1Q8K2Q9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Shtn1Q8K2Q9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Shtn1Q8K2Q9 Golgb1-201ENSMUST00000023534 498 ntBASIC25.5■■□□□ 1.67
Shtn1Q8K2Q9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shtn1Q8K2Q9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shtn1Q8K2Q9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shtn1Q8K2Q9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms