Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim68Q8K243 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trim68Q8K243 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.3■■□□□ 1.32
Trim68Q8K243 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim68Q8K243 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim68Q8K243 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trim68Q8K243 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Trim68Q8K243 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim68Q8K243 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Trim68Q8K243 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim68Q8K243 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trim68Q8K243 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Trim68Q8K243 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim68Q8K243 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim68Q8K243 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Trim68Q8K243 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trim68Q8K243 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim68Q8K243 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim68Q8K243 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim68Q8K243 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim68Q8K243 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim68Q8K243 Gm7417-201ENSMUST00000192950 473 ntBASIC23.25■■□□□ 1.31
Trim68Q8K243 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim68Q8K243 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.24■■□□□ 1.31
Trim68Q8K243 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim68Q8K243 Gm13241-201ENSMUST00000094493 780 ntBASIC23.24■■□□□ 1.31
Trim68Q8K243 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.24■■□□□ 1.31
Trim68Q8K243 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim68Q8K243 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim68Q8K243 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trim68Q8K243 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim68Q8K243 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim68Q8K243 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim68Q8K243 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim68Q8K243 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.22■■□□□ 1.31
Trim68Q8K243 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim68Q8K243 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim68Q8K243 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim68Q8K243 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim68Q8K243 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trim68Q8K243 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim68Q8K243 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Trim68Q8K243 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.19■■□□□ 1.3
Trim68Q8K243 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim68Q8K243 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Trim68Q8K243 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim68Q8K243 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim68Q8K243 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim68Q8K243 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim68Q8K243 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim68Q8K243 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim68Q8K243 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim68Q8K243 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.18■■□□□ 1.3
Trim68Q8K243 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Trim68Q8K243 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim68Q8K243 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.17■■□□□ 1.3
Trim68Q8K243 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim68Q8K243 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.17■■□□□ 1.3
Trim68Q8K243 Gm21956-201ENSMUST00000179946 522 ntBASIC23.17■■□□□ 1.3
Trim68Q8K243 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim68Q8K243 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Trim68Q8K243 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.16■■□□□ 1.3
Trim68Q8K243 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim68Q8K243 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.16■■□□□ 1.3
Trim68Q8K243 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.16■■□□□ 1.3
Trim68Q8K243 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.16■■□□□ 1.3
Trim68Q8K243 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim68Q8K243 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim68Q8K243 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Trim68Q8K243 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim68Q8K243 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim68Q8K243 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim68Q8K243 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim68Q8K243 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Trim68Q8K243 Gm9847-201ENSMUST00000052528 599 ntBASIC23.14■■□□□ 1.29
Trim68Q8K243 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim68Q8K243 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Trim68Q8K243 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim68Q8K243 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Trim68Q8K243 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.13■■□□□ 1.29
Trim68Q8K243 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim68Q8K243 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim68Q8K243 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms