Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.53■■■□□ 2.16
Rsph6aQ8CDR2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28.53■■■□□ 2.16
Rsph6aQ8CDR2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Rsph6aQ8CDR2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rsph6aQ8CDR2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rsph6aQ8CDR2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.52■■■□□ 2.16
Rsph6aQ8CDR2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC28.51■■■□□ 2.15
Rsph6aQ8CDR2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC28.51■■■□□ 2.15
Rsph6aQ8CDR2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rsph6aQ8CDR2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Rsph6aQ8CDR2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rsph6aQ8CDR2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rsph6aQ8CDR2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC28.5■■■□□ 2.15
Rsph6aQ8CDR2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rsph6aQ8CDR2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rsph6aQ8CDR2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Etf1-202ENSMUST00000180351 108 ntBASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Rsph6aQ8CDR2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.47■■■□□ 2.15
Rsph6aQ8CDR2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rsph6aQ8CDR2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rsph6aQ8CDR2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rsph6aQ8CDR2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC28.47■■■□□ 2.15
Rsph6aQ8CDR2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Rsph6aQ8CDR2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Rsph6aQ8CDR2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Rsph6aQ8CDR2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Rsph6aQ8CDR2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.45■■■□□ 2.14
Rsph6aQ8CDR2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rsph6aQ8CDR2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rsph6aQ8CDR2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC28.44■■■□□ 2.14
Rsph6aQ8CDR2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.44■■■□□ 2.14
Rsph6aQ8CDR2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rsph6aQ8CDR2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rsph6aQ8CDR2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Gm11847-201ENSMUST00000125165 1119 ntBASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rsph6aQ8CDR2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC28.42■■■□□ 2.14
Rsph6aQ8CDR2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC28.42■■■□□ 2.14
Rsph6aQ8CDR2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC28.42■■■□□ 2.14
Rsph6aQ8CDR2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph6aQ8CDR2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph6aQ8CDR2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC28.41■■■□□ 2.14
Rsph6aQ8CDR2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph6aQ8CDR2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Gm8093-201ENSMUST00000128935 1892 ntBASIC28.4■■■□□ 2.14
Rsph6aQ8CDR2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph6aQ8CDR2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph6aQ8CDR2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.38■■■□□ 2.13
Rsph6aQ8CDR2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph6aQ8CDR2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph6aQ8CDR2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph6aQ8CDR2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph6aQ8CDR2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph6aQ8CDR2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph6aQ8CDR2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms