Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm9949Q8C9F4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Gm9949Q8C9F4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm9949Q8C9F4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm9949Q8C9F4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm9949Q8C9F4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm9949Q8C9F4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm9949Q8C9F4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm9949Q8C9F4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm9949Q8C9F4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.02■□□□□ 0.32
Gm9949Q8C9F4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm9949Q8C9F4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Gm9949Q8C9F4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm9949Q8C9F4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm9949Q8C9F4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm9949Q8C9F4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm9949Q8C9F4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm9949Q8C9F4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm9949Q8C9F4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm9949Q8C9F4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm9949Q8C9F4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm9949Q8C9F4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm9949Q8C9F4 Cap2-205ENSMUST00000225824 1634 ntBASIC17■□□□□ 0.31
Gm9949Q8C9F4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm9949Q8C9F4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm9949Q8C9F4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm9949Q8C9F4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm9949Q8C9F4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm9949Q8C9F4 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.99■□□□□ 0.31
Gm9949Q8C9F4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm9949Q8C9F4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm9949Q8C9F4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm9949Q8C9F4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm9949Q8C9F4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm9949Q8C9F4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm9949Q8C9F4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm9949Q8C9F4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm9949Q8C9F4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm9949Q8C9F4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm9949Q8C9F4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm9949Q8C9F4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms