Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap1Q8BTW8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdk5rap1Q8BTW8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdk5rap1Q8BTW8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdk5rap1Q8BTW8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Cdk5rap1Q8BTW8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdk5rap1Q8BTW8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.52■□□□□ 0.87
Cdk5rap1Q8BTW8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk5rap1Q8BTW8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk5rap1Q8BTW8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdk5rap1Q8BTW8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdk5rap1Q8BTW8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.51■□□□□ 0.87
Cdk5rap1Q8BTW8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdk5rap1Q8BTW8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk5rap1Q8BTW8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk5rap1Q8BTW8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdk5rap1Q8BTW8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdk5rap1Q8BTW8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cdk5rap1Q8BTW8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdk5rap1Q8BTW8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdk5rap1Q8BTW8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Gm14117-201ENSMUST00000122417 843 ntBASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdk5rap1Q8BTW8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap1Q8BTW8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap1Q8BTW8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap1Q8BTW8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cdk5rap1Q8BTW8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Cdk5rap1Q8BTW8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap1Q8BTW8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap1Q8BTW8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms