Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpne4Q8BLR2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne4Q8BLR2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne4Q8BLR2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cpne4Q8BLR2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cpne4Q8BLR2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpne4Q8BLR2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne4Q8BLR2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne4Q8BLR2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne4Q8BLR2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne4Q8BLR2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.26■□□□□ 0.67
Cpne4Q8BLR2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne4Q8BLR2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne4Q8BLR2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne4Q8BLR2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne4Q8BLR2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne4Q8BLR2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cpne4Q8BLR2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.21■□□□□ 0.67
Cpne4Q8BLR2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne4Q8BLR2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne4Q8BLR2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne4Q8BLR2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpne4Q8BLR2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cpne4Q8BLR2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne4Q8BLR2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne4Q8BLR2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne4Q8BLR2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne4Q8BLR2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cpne4Q8BLR2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cpne4Q8BLR2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne4Q8BLR2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne4Q8BLR2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne4Q8BLR2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms