Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn34b3Q80ZS5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn34b3Q80ZS5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn34b3Q80ZS5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn34b3Q80ZS5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn34b3Q80ZS5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn34b3Q80ZS5 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.11■□□□□ 0.81
Cldn34b3Q80ZS5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn34b3Q80ZS5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn34b3Q80ZS5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.1■□□□□ 0.81
Cldn34b3Q80ZS5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn34b3Q80ZS5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn34b3Q80ZS5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn34b3Q80ZS5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn34b3Q80ZS5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn34b3Q80ZS5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn34b3Q80ZS5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn34b3Q80ZS5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn34b3Q80ZS5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn34b3Q80ZS5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn34b3Q80ZS5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn34b3Q80ZS5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.02■□□□□ 0.8
Cldn34b3Q80ZS5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn34b3Q80ZS5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn34b3Q80ZS5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.02■□□□□ 0.8
Cldn34b3Q80ZS5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn34b3Q80ZS5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn34b3Q80ZS5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn34b3Q80ZS5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn34b3Q80ZS5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn34b3Q80ZS5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn34b3Q80ZS5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn34b3Q80ZS5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn34b3Q80ZS5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn34b3Q80ZS5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.98■□□□□ 0.79
Cldn34b3Q80ZS5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn34b3Q80ZS5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.98■□□□□ 0.79
Cldn34b3Q80ZS5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms