Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vrk1Q80X41 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vrk1Q80X41 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vrk1Q80X41 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vrk1Q80X41 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.63■□□□□ 0.89
Vrk1Q80X41 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vrk1Q80X41 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vrk1Q80X41 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vrk1Q80X41 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.62■□□□□ 0.89
Vrk1Q80X41 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.62■□□□□ 0.89
Vrk1Q80X41 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk1Q80X41 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vrk1Q80X41 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vrk1Q80X41 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Vrk1Q80X41 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vrk1Q80X41 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vrk1Q80X41 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk1Q80X41 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.59■□□□□ 0.89
Vrk1Q80X41 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk1Q80X41 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk1Q80X41 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.59■□□□□ 0.89
Vrk1Q80X41 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk1Q80X41 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vrk1Q80X41 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk1Q80X41 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk1Q80X41 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk1Q80X41 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk1Q80X41 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk1Q80X41 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk1Q80X41 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.57■□□□□ 0.88
Vrk1Q80X41 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vrk1Q80X41 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vrk1Q80X41 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk1Q80X41 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vrk1Q80X41 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vrk1Q80X41 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.55■□□□□ 0.88
Vrk1Q80X41 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vrk1Q80X41 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.55■□□□□ 0.88
Vrk1Q80X41 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.55■□□□□ 0.88
Vrk1Q80X41 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vrk1Q80X41 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.54■□□□□ 0.88
Vrk1Q80X41 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.54■□□□□ 0.88
Vrk1Q80X41 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk1Q80X41 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vrk1Q80X41 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vrk1Q80X41 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Gm40881-201ENSMUST00000223397 166 ntBASIC20.52■□□□□ 0.88
Vrk1Q80X41 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.52■□□□□ 0.88
Vrk1Q80X41 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk1Q80X41 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Vrk1Q80X41 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vrk1Q80X41 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vrk1Q80X41 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.51■□□□□ 0.87
Vrk1Q80X41 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vrk1Q80X41 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.5■□□□□ 0.87
Vrk1Q80X41 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vrk1Q80X41 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms