Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.9■□□□□ 0.78
Pif1Q80SX8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pif1Q80SX8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pif1Q80SX8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pif1Q80SX8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pif1Q80SX8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pif1Q80SX8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pif1Q80SX8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.89■□□□□ 0.77
Pif1Q80SX8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pif1Q80SX8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pif1Q80SX8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Pif1Q80SX8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pif1Q80SX8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.87■□□□□ 0.77
Pif1Q80SX8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pif1Q80SX8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.86■□□□□ 0.77
Pif1Q80SX8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pif1Q80SX8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Pif1Q80SX8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.85■□□□□ 0.77
Pif1Q80SX8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Pif1Q80SX8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pif1Q80SX8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pif1Q80SX8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pif1Q80SX8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pif1Q80SX8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pif1Q80SX8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pif1Q80SX8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pif1Q80SX8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.83■□□□□ 0.77
Pif1Q80SX8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pif1Q80SX8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pif1Q80SX8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pif1Q80SX8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.82■□□□□ 0.76
Pif1Q80SX8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pif1Q80SX8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pif1Q80SX8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pif1Q80SX8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pif1Q80SX8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.81■□□□□ 0.76
Pif1Q80SX8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pif1Q80SX8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pif1Q80SX8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pif1Q80SX8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pif1Q80SX8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pif1Q80SX8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pif1Q80SX8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pif1Q80SX8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.8■□□□□ 0.76
Pif1Q80SX8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.79■□□□□ 0.76
Pif1Q80SX8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pif1Q80SX8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.78■□□□□ 0.76
Pif1Q80SX8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pif1Q80SX8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.78■□□□□ 0.76
Pif1Q80SX8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.78■□□□□ 0.76
Pif1Q80SX8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Gm13241-201ENSMUST00000094493 780 ntBASIC19.78■□□□□ 0.76
Pif1Q80SX8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pif1Q80SX8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms