Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Lsm8Q6ZWM4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Lsm8Q6ZWM4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lsm8Q6ZWM4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Lsm8Q6ZWM4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Lsm8Q6ZWM4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Lsm8Q6ZWM4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lsm8Q6ZWM4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lsm8Q6ZWM4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.74■■□□□ 1.23
Lsm8Q6ZWM4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.74■■□□□ 1.23
Lsm8Q6ZWM4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.74■■□□□ 1.23
Lsm8Q6ZWM4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lsm8Q6ZWM4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Lsm8Q6ZWM4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lsm8Q6ZWM4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lsm8Q6ZWM4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lsm8Q6ZWM4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lsm8Q6ZWM4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.72■■□□□ 1.23
Lsm8Q6ZWM4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Lsm8Q6ZWM4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Lsm8Q6ZWM4 Cap2-205ENSMUST00000225824 1634 ntBASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsm8Q6ZWM4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.7■■□□□ 1.23
Lsm8Q6ZWM4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Lsm8Q6ZWM4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Lsm8Q6ZWM4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Lsm8Q6ZWM4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Lsm8Q6ZWM4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.7■■□□□ 1.22
Lsm8Q6ZWM4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Lsm8Q6ZWM4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsm8Q6ZWM4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsm8Q6ZWM4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Lsm8Q6ZWM4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.69■■□□□ 1.22
Lsm8Q6ZWM4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.68■■□□□ 1.22
Lsm8Q6ZWM4 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.68■■□□□ 1.22
Lsm8Q6ZWM4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lsm8Q6ZWM4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Lsm8Q6ZWM4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsm8Q6ZWM4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lsm8Q6ZWM4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.65■■□□□ 1.22
Lsm8Q6ZWM4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.64■■□□□ 1.21
Lsm8Q6ZWM4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsm8Q6ZWM4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.62■■□□□ 1.21
Lsm8Q6ZWM4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Lsm8Q6ZWM4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsm8Q6ZWM4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsm8Q6ZWM4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms