Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.34■■□□□ 1.65
Scn10aQ6QIY3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Scn10aQ6QIY3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Scn10aQ6QIY3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Scn10aQ6QIY3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Scn10aQ6QIY3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Gm45417-201ENSMUST00000209533 758 ntBASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scn10aQ6QIY3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scn10aQ6QIY3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Golgb1-201ENSMUST00000023534 498 ntBASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Gm12821-201ENSMUST00000120022 600 ntBASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scn10aQ6QIY3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
Scn10aQ6QIY3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scn10aQ6QIY3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Scn10aQ6QIY3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Scn10aQ6QIY3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scn10aQ6QIY3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Scn10aQ6QIY3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scn10aQ6QIY3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Scn10aQ6QIY3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Scn10aQ6QIY3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Scn10aQ6QIY3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms