Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx4Q61496 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx4Q61496 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ddx4Q61496 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx4Q61496 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Ddx4Q61496 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.14■■□□□ 1.45
Ddx4Q61496 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx4Q61496 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx4Q61496 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.13■■□□□ 1.45
Ddx4Q61496 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx4Q61496 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx4Q61496 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx4Q61496 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx4Q61496 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx4Q61496 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx4Q61496 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Ddx4Q61496 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx4Q61496 Gm27454-201ENSMUST00000185090 204 ntBASIC24.11■■□□□ 1.45
Ddx4Q61496 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx4Q61496 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx4Q61496 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx4Q61496 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.1■■□□□ 1.45
Ddx4Q61496 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx4Q61496 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx4Q61496 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx4Q61496 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.1■■□□□ 1.45
Ddx4Q61496 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.09■■□□□ 1.45
Ddx4Q61496 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.09■■□□□ 1.45
Ddx4Q61496 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ddx4Q61496 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx4Q61496 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx4Q61496 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx4Q61496 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx4Q61496 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ddx4Q61496 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx4Q61496 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx4Q61496 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.07■■□□□ 1.44
Ddx4Q61496 Gm45417-201ENSMUST00000209533 758 ntBASIC24.06■■□□□ 1.44
Ddx4Q61496 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx4Q61496 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx4Q61496 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx4Q61496 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
Ddx4Q61496 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx4Q61496 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx4Q61496 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx4Q61496 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Ddx4Q61496 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.05■■□□□ 1.44
Ddx4Q61496 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx4Q61496 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx4Q61496 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx4Q61496 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx4Q61496 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx4Q61496 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx4Q61496 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx4Q61496 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx4Q61496 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx4Q61496 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx4Q61496 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx4Q61496 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.02■■□□□ 1.44
Ddx4Q61496 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.02■■□□□ 1.44
Ddx4Q61496 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.02■■□□□ 1.44
Ddx4Q61496 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx4Q61496 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx4Q61496 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.01■■□□□ 1.43
Ddx4Q61496 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx4Q61496 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.01■■□□□ 1.43
Ddx4Q61496 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx4Q61496 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx4Q61496 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Ddx4Q61496 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx4Q61496 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx4Q61496 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx4Q61496 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ddx4Q61496 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.98■■□□□ 1.43
Ddx4Q61496 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx4Q61496 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx4Q61496 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx4Q61496 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.97■■□□□ 1.43
Ddx4Q61496 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx4Q61496 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx4Q61496 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ddx4Q61496 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.96■■□□□ 1.43
Ddx4Q61496 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx4Q61496 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx4Q61496 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx4Q61496 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.95■■□□□ 1.42
Ddx4Q61496 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx4Q61496 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
Ddx4Q61496 Golgb1-201ENSMUST00000023534 498 ntBASIC23.95■■□□□ 1.42
Ddx4Q61496 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx4Q61496 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.94■■□□□ 1.42
Ddx4Q61496 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
Ddx4Q61496 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx4Q61496 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms