Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcfc1Q61191 Gm27454-201ENSMUST00000185090 204 ntBASIC18.6■□□□□ 0.57
Hcfc1Q61191 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.6■□□□□ 0.57
Hcfc1Q61191 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcfc1Q61191 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.59■□□□□ 0.57
Hcfc1Q61191 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcfc1Q61191 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hcfc1Q61191 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.59■□□□□ 0.57
Hcfc1Q61191 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.59■□□□□ 0.57
Hcfc1Q61191 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcfc1Q61191 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcfc1Q61191 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcfc1Q61191 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hcfc1Q61191 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hcfc1Q61191 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcfc1Q61191 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcfc1Q61191 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcfc1Q61191 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcfc1Q61191 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcfc1Q61191 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1Q61191 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.54■□□□□ 0.56
Hcfc1Q61191 Gm45417-201ENSMUST00000209533 758 ntBASIC18.54■□□□□ 0.56
Hcfc1Q61191 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1Q61191 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcfc1Q61191 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.53■□□□□ 0.56
Hcfc1Q61191 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hcfc1Q61191 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.53■□□□□ 0.56
Hcfc1Q61191 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.52■□□□□ 0.56
Hcfc1Q61191 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1Q61191 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1Q61191 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1Q61191 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hcfc1Q61191 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hcfc1Q61191 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.52■□□□□ 0.55
Hcfc1Q61191 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Gm12821-201ENSMUST00000120022 600 ntBASIC18.51■□□□□ 0.55
Hcfc1Q61191 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hcfc1Q61191 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1Q61191 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hcfc1Q61191 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hcfc1Q61191 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hcfc1Q61191 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1Q61191 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1Q61191 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1Q61191 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1Q61191 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hcfc1Q61191 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1Q61191 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hcfc1Q61191 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1Q61191 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hcfc1Q61191 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.47■□□□□ 0.55
Hcfc1Q61191 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hcfc1Q61191 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hcfc1Q61191 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1Q61191 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1Q61191 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hcfc1Q61191 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hcfc1Q61191 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Hcfc1Q61191 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1Q61191 Golgb1-201ENSMUST00000023534 498 ntBASIC18.45■□□□□ 0.54
Hcfc1Q61191 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1Q61191 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hcfc1Q61191 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1Q61191 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1Q61191 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.45■□□□□ 0.54
Hcfc1Q61191 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcfc1Q61191 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hcfc1Q61191 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.44■□□□□ 0.54
Hcfc1Q61191 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1Q61191 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcfc1Q61191 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms