Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28bQ45KJ6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28bQ45KJ6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lin28bQ45KJ6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Lin28bQ45KJ6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms