Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
B020004J07RikQ3UTC0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.59■■□□□ 1.21
B020004J07RikQ3UTC0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.59■■□□□ 1.21
B020004J07RikQ3UTC0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.59■■□□□ 1.21
B020004J07RikQ3UTC0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
B020004J07RikQ3UTC0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
B020004J07RikQ3UTC0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
B020004J07RikQ3UTC0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
B020004J07RikQ3UTC0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
B020004J07RikQ3UTC0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
B020004J07RikQ3UTC0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
B020004J07RikQ3UTC0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004J07RikQ3UTC0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004J07RikQ3UTC0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
B020004J07RikQ3UTC0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
B020004J07RikQ3UTC0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
B020004J07RikQ3UTC0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004J07RikQ3UTC0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
B020004J07RikQ3UTC0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004J07RikQ3UTC0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004J07RikQ3UTC0 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
B020004J07RikQ3UTC0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Gm7417-201ENSMUST00000192950 473 ntBASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004J07RikQ3UTC0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004J07RikQ3UTC0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004J07RikQ3UTC0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
B020004J07RikQ3UTC0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.49■■□□□ 1.19
B020004J07RikQ3UTC0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004J07RikQ3UTC0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004J07RikQ3UTC0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004J07RikQ3UTC0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
B020004J07RikQ3UTC0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.48■■□□□ 1.19
B020004J07RikQ3UTC0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004J07RikQ3UTC0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
B020004J07RikQ3UTC0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms