Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Brf2Q3UAW9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brf2Q3UAW9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.3■□□□□ 0.84
Brf2Q3UAW9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.29■□□□□ 0.84
Brf2Q3UAW9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brf2Q3UAW9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brf2Q3UAW9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Brf2Q3UAW9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Brf2Q3UAW9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Brf2Q3UAW9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Brf2Q3UAW9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Brf2Q3UAW9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brf2Q3UAW9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brf2Q3UAW9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Brf2Q3UAW9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Brf2Q3UAW9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brf2Q3UAW9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms