Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3U1D9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3U1D9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3U1D9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3U1D9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.78■□□□□ 0.6
Q3U1D9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3U1D9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3U1D9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3U1D9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3U1D9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.77■□□□□ 0.6
Q3U1D9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.77■□□□□ 0.6
Q3U1D9 Etf1-202ENSMUST00000180351 108 ntBASIC18.77■□□□□ 0.6
Q3U1D9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Q3U1D9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q3U1D9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q3U1D9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Q3U1D9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q3U1D9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q3U1D9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q3U1D9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Q3U1D9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Q3U1D9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Q3U1D9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Q3U1D9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Q3U1D9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q3U1D9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q3U1D9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Q3U1D9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.74■□□□□ 0.59
Q3U1D9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.74■□□□□ 0.59
Q3U1D9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q3U1D9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q3U1D9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q3U1D9 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.73■□□□□ 0.59
Q3U1D9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.73■□□□□ 0.59
Q3U1D9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Q3U1D9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Q3U1D9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q3U1D9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q3U1D9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.72■□□□□ 0.59
Q3U1D9 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.72■□□□□ 0.59
Q3U1D9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q3U1D9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q3U1D9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q3U1D9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.71■□□□□ 0.59
Q3U1D9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q3U1D9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.71■□□□□ 0.59
Q3U1D9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q3U1D9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.7■□□□□ 0.58
Q3U1D9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q3U1D9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3U1D9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q3U1D9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Q3U1D9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.69■□□□□ 0.58
Q3U1D9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Q3U1D9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.68■□□□□ 0.58
Q3U1D9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3U1D9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.68■□□□□ 0.58
Q3U1D9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q3U1D9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.68■□□□□ 0.58
Q3U1D9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.67■□□□□ 0.58
Q3U1D9 Gm7417-201ENSMUST00000192950 473 ntBASIC18.67■□□□□ 0.58
Q3U1D9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q3U1D9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Q3U1D9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.66■□□□□ 0.58
Q3U1D9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.66■□□□□ 0.58
Q3U1D9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms