Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Thumpd3P97770 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
Thumpd3P97770 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Thumpd3P97770 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Thumpd3P97770 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.82■■□□□ 1.08
Thumpd3P97770 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Gm9812-201ENSMUST00000061934 968 ntBASIC21.82■■□□□ 1.08
Thumpd3P97770 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Thumpd3P97770 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Thumpd3P97770 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Thumpd3P97770 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Thumpd3P97770 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.81■■□□□ 1.08
Thumpd3P97770 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Thumpd3P97770 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Thumpd3P97770 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.8■■□□□ 1.08
Thumpd3P97770 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Thumpd3P97770 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.8■■□□□ 1.08
Thumpd3P97770 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Thumpd3P97770 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Thumpd3P97770 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.79■■□□□ 1.08
Thumpd3P97770 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thumpd3P97770 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Thumpd3P97770 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thumpd3P97770 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.79■■□□□ 1.08
Thumpd3P97770 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thumpd3P97770 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Thumpd3P97770 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Thumpd3P97770 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.79■■□□□ 1.08
Thumpd3P97770 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Thumpd3P97770 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Thumpd3P97770 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Thumpd3P97770 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.78■■□□□ 1.08
Thumpd3P97770 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Thumpd3P97770 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Thumpd3P97770 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Thumpd3P97770 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.77■■□□□ 1.08
Thumpd3P97770 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.77■■□□□ 1.08
Thumpd3P97770 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Gm7332-201ENSMUST00000118351 454 ntBASIC21.76■■□□□ 1.07
Thumpd3P97770 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.76■■□□□ 1.07
Thumpd3P97770 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.76■■□□□ 1.07
Thumpd3P97770 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Thumpd3P97770 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Thumpd3P97770 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Thumpd3P97770 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.74■■□□□ 1.07
Thumpd3P97770 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.74■■□□□ 1.07
Thumpd3P97770 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Thumpd3P97770 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Thumpd3P97770 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Thumpd3P97770 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Thumpd3P97770 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Thumpd3P97770 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Thumpd3P97770 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Thumpd3P97770 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Thumpd3P97770 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Thumpd3P97770 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Thumpd3P97770 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Thumpd3P97770 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Thumpd3P97770 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.7■■□□□ 1.06
Thumpd3P97770 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Thumpd3P97770 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Thumpd3P97770 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Thumpd3P97770 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms