Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Hist1h3bP84228 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h3bP84228 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h3bP84228 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h3bP84228 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h3bP84228 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
Hist1h3bP84228 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hist1h3bP84228 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h3bP84228 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.91■□□□□ 0.62
Hist1h3bP84228 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h3bP84228 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Hist1h3bP84228 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hist1h3bP84228 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.89■□□□□ 0.61
Hist1h3bP84228 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h3bP84228 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h3bP84228 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Gm7332-201ENSMUST00000118351 454 ntBASIC18.87■□□□□ 0.61
Hist1h3bP84228 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.87■□□□□ 0.61
Hist1h3bP84228 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h3bP84228 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.86■□□□□ 0.61
Hist1h3bP84228 Gm12366-201ENSMUST00000121722 873 ntBASIC18.86■□□□□ 0.61
Hist1h3bP84228 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.86■□□□□ 0.61
Hist1h3bP84228 Gm5786-201ENSMUST00000085368 882 ntBASIC18.86■□□□□ 0.61
Hist1h3bP84228 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hist1h3bP84228 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h3bP84228 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.85■□□□□ 0.61
Hist1h3bP84228 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h3bP84228 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h3bP84228 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h3bP84228 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms