Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ybx1P62960 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.35■■□□□ 1.17
Ybx1P62960 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ybx1P62960 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ybx1P62960 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ybx1P62960 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Ybx1P62960 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ybx1P62960 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ybx1P62960 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ybx1P62960 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ybx1P62960 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ybx1P62960 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ybx1P62960 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ybx1P62960 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ybx1P62960 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ybx1P62960 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ybx1P62960 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ybx1P62960 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ybx1P62960 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ybx1P62960 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ybx1P62960 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ybx1P62960 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.31■■□□□ 1.16
Ybx1P62960 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.31■■□□□ 1.16
Ybx1P62960 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.31■■□□□ 1.16
Ybx1P62960 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ybx1P62960 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ybx1P62960 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.3■■□□□ 1.16
Ybx1P62960 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ybx1P62960 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.3■■□□□ 1.16
Ybx1P62960 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ybx1P62960 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.29■■□□□ 1.16
Ybx1P62960 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.29■■□□□ 1.16
Ybx1P62960 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ybx1P62960 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ybx1P62960 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ybx1P62960 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ybx1P62960 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.28■■□□□ 1.16
Ybx1P62960 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ybx1P62960 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.27■■□□□ 1.16
Ybx1P62960 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ybx1P62960 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.26■■□□□ 1.15
Ybx1P62960 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.26■■□□□ 1.15
Ybx1P62960 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ybx1P62960 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.25■■□□□ 1.15
Ybx1P62960 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.25■■□□□ 1.15
Ybx1P62960 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.25■■□□□ 1.15
Ybx1P62960 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ybx1P62960 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ybx1P62960 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ybx1P62960 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ybx1P62960 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ybx1P62960 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.23■■□□□ 1.15
Ybx1P62960 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ybx1P62960 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Ybx1P62960 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.22■■□□□ 1.15
Ybx1P62960 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ybx1P62960 Gm22238-201ENSMUST00000175222 88 ntBASIC22.22■■□□□ 1.15
Ybx1P62960 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.22■■□□□ 1.15
Ybx1P62960 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.22■■□□□ 1.15
Ybx1P62960 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
Ybx1P62960 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ybx1P62960 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.21■■□□□ 1.15
Ybx1P62960 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ybx1P62960 Gm40881-201ENSMUST00000223397 166 ntBASIC22.21■■□□□ 1.15
Ybx1P62960 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ybx1P62960 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.2■■□□□ 1.15
Ybx1P62960 Gm21956-201ENSMUST00000179946 522 ntBASIC22.2■■□□□ 1.14
Ybx1P62960 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ybx1P62960 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.2■■□□□ 1.14
Ybx1P62960 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.2■■□□□ 1.14
Ybx1P62960 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.2■■□□□ 1.14
Ybx1P62960 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.2■■□□□ 1.14
Ybx1P62960 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.2■■□□□ 1.14
Ybx1P62960 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ybx1P62960 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ybx1P62960 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ybx1P62960 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms