Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm3P62311 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lsm3P62311 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm3P62311 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm3P62311 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.69■□□□□ 0.74
Lsm3P62311 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lsm3P62311 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.69■□□□□ 0.74
Lsm3P62311 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm3P62311 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm3P62311 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.69■□□□□ 0.74
Lsm3P62311 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm3P62311 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm3P62311 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.69■□□□□ 0.74
Lsm3P62311 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lsm3P62311 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm3P62311 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lsm3P62311 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lsm3P62311 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm3P62311 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm3P62311 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm3P62311 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lsm3P62311 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm3P62311 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm3P62311 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.66■□□□□ 0.74
Lsm3P62311 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm3P62311 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.66■□□□□ 0.74
Lsm3P62311 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lsm3P62311 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Lsm3P62311 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lsm3P62311 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm3P62311 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lsm3P62311 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.65■□□□□ 0.74
Lsm3P62311 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm3P62311 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm3P62311 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm3P62311 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm3P62311 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lsm3P62311 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lsm3P62311 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.64■□□□□ 0.73
Lsm3P62311 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsm3P62311 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lsm3P62311 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm3P62311 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm3P62311 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lsm3P62311 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.63■□□□□ 0.73
Lsm3P62311 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Lsm3P62311 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm3P62311 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm3P62311 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Lsm3P62311 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm3P62311 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.61■□□□□ 0.73
Lsm3P62311 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm3P62311 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm3P62311 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm3P62311 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm3P62311 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Lsm3P62311 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm3P62311 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm3P62311 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm3P62311 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm3P62311 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm3P62311 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm3P62311 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm3P62311 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm3P62311 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm3P62311 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.57■□□□□ 0.72
Lsm3P62311 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm3P62311 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm3P62311 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Lsm3P62311 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm3P62311 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Lsm3P62311 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm3P62311 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm3P62311 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm3P62311 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm3P62311 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 179.2 ms