Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a1P61620 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a1P61620 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a1P61620 Gm27502-201ENSMUST00000183495 199 ntBASIC18.86■□□□□ 0.61
Sec61a1P61620 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a1P61620 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a1P61620 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a1P61620 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sec61a1P61620 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.84■□□□□ 0.61
Sec61a1P61620 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a1P61620 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a1P61620 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.84■□□□□ 0.61
Sec61a1P61620 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a1P61620 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sec61a1P61620 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sec61a1P61620 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sec61a1P61620 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sec61a1P61620 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Sec61a1P61620 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a1P61620 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.83■□□□□ 0.6
Sec61a1P61620 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sec61a1P61620 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a1P61620 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sec61a1P61620 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a1P61620 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a1P61620 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a1P61620 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.82■□□□□ 0.6
Sec61a1P61620 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a1P61620 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sec61a1P61620 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a1P61620 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sec61a1P61620 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a1P61620 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.82■□□□□ 0.6
Sec61a1P61620 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a1P61620 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sec61a1P61620 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a1P61620 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a1P61620 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sec61a1P61620 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a1P61620 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a1P61620 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a1P61620 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.8■□□□□ 0.6
Sec61a1P61620 Gm12366-201ENSMUST00000121722 873 ntBASIC18.8■□□□□ 0.6
Sec61a1P61620 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.8■□□□□ 0.6
Sec61a1P61620 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sec61a1P61620 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.8■□□□□ 0.6
Sec61a1P61620 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.8■□□□□ 0.6
Sec61a1P61620 Gm5786-201ENSMUST00000085368 882 ntBASIC18.8■□□□□ 0.6
Sec61a1P61620 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a1P61620 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a1P61620 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a1P61620 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a1P61620 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sec61a1P61620 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a1P61620 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a1P61620 Terc-201ENSMUST00000082862 423 ntBASIC18.79■□□□□ 0.6
Sec61a1P61620 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.79■□□□□ 0.6
Sec61a1P61620 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sec61a1P61620 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sec61a1P61620 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.78■□□□□ 0.6
Sec61a1P61620 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sec61a1P61620 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.78■□□□□ 0.6
Sec61a1P61620 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a1P61620 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.77■□□□□ 0.6
Sec61a1P61620 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.77■□□□□ 0.6
Sec61a1P61620 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a1P61620 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Sec61a1P61620 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sec61a1P61620 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec61a1P61620 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.76■□□□□ 0.59
Sec61a1P61620 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sec61a1P61620 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.76■□□□□ 0.59
Sec61a1P61620 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sec61a1P61620 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a1P61620 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Sec61a1P61620 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a1P61620 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms