Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp6v1aP50516 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp6v1aP50516 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.25■■□□□ 1.79
Atp6v1aP50516 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp6v1aP50516 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1aP50516 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Atp6v1aP50516 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Atp6v1aP50516 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.23■■□□□ 1.79
Atp6v1aP50516 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Gm10399-202ENSMUST00000202768 748 ntBASIC26.22■■□□□ 1.79
Atp6v1aP50516 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp6v1aP50516 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp6v1aP50516 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
Atp6v1aP50516 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Atp6v1aP50516 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp6v1aP50516 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp6v1aP50516 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.2■■□□□ 1.79
Atp6v1aP50516 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp6v1aP50516 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Atp6v1aP50516 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp6v1aP50516 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp6v1aP50516 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp6v1aP50516 Gm12922-201ENSMUST00000120626 809 ntBASIC26.19■■□□□ 1.78
Atp6v1aP50516 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.19■■□□□ 1.78
Atp6v1aP50516 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.19■■□□□ 1.78
Atp6v1aP50516 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp6v1aP50516 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.19■■□□□ 1.78
Atp6v1aP50516 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.18■■□□□ 1.78
Atp6v1aP50516 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Atp6v1aP50516 Serp2-204ENSMUST00000228055 705 ntBASIC26.18■■□□□ 1.78
Atp6v1aP50516 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atp6v1aP50516 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Atp6v1aP50516 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Atp6v1aP50516 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Atp6v1aP50516 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Atp6v1aP50516 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
Atp6v1aP50516 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Atp6v1aP50516 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Atp6v1aP50516 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.16■■□□□ 1.78
Atp6v1aP50516 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.16■■□□□ 1.78
Atp6v1aP50516 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.16■■□□□ 1.78
Atp6v1aP50516 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1aP50516 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1aP50516 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1aP50516 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1aP50516 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1aP50516 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp6v1aP50516 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp6v1aP50516 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp6v1aP50516 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp6v1aP50516 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp6v1aP50516 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Atp6v1aP50516 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Atp6v1aP50516 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.13■■□□□ 1.77
Atp6v1aP50516 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.13■■□□□ 1.77
Atp6v1aP50516 Appbp2os-202ENSMUST00000206972 447 ntBASIC26.13■■□□□ 1.77
Atp6v1aP50516 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atp6v1aP50516 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atp6v1aP50516 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atp6v1aP50516 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atp6v1aP50516 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Atp6v1aP50516 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Atp6v1aP50516 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atp6v1aP50516 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atp6v1aP50516 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atp6v1aP50516 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atp6v1aP50516 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.08■■□□□ 1.77
Atp6v1aP50516 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atp6v1aP50516 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Atp6v1aP50516 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp6v1aP50516 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atp6v1aP50516 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atp6v1aP50516 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.05■■□□□ 1.76
Atp6v1aP50516 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atp6v1aP50516 Gm12821-201ENSMUST00000120022 600 ntBASIC26.05■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms