Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TgfaP48030 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TgfaP48030 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TgfaP48030 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TgfaP48030 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.91■□□□□ 0.62
TgfaP48030 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TgfaP48030 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TgfaP48030 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TgfaP48030 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.9■□□□□ 0.62
TgfaP48030 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TgfaP48030 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.9■□□□□ 0.62
TgfaP48030 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TgfaP48030 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TgfaP48030 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.89■□□□□ 0.62
TgfaP48030 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.89■□□□□ 0.61
TgfaP48030 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.89■□□□□ 0.61
TgfaP48030 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TgfaP48030 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
TgfaP48030 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TgfaP48030 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TgfaP48030 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TgfaP48030 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TgfaP48030 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TgfaP48030 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TgfaP48030 Gm27454-201ENSMUST00000185090 204 ntBASIC18.87■□□□□ 0.61
TgfaP48030 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TgfaP48030 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.86■□□□□ 0.61
TgfaP48030 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TgfaP48030 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TgfaP48030 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TgfaP48030 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TgfaP48030 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TgfaP48030 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TgfaP48030 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TgfaP48030 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TgfaP48030 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TgfaP48030 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TgfaP48030 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.84■□□□□ 0.61
TgfaP48030 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TgfaP48030 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TgfaP48030 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TgfaP48030 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TgfaP48030 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
TgfaP48030 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TgfaP48030 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.83■□□□□ 0.6
TgfaP48030 Gm45417-201ENSMUST00000209533 758 ntBASIC18.83■□□□□ 0.6
TgfaP48030 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TgfaP48030 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TgfaP48030 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TgfaP48030 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TgfaP48030 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TgfaP48030 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TgfaP48030 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.81■□□□□ 0.6
TgfaP48030 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.81■□□□□ 0.6
TgfaP48030 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TgfaP48030 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TgfaP48030 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TgfaP48030 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TgfaP48030 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.8■□□□□ 0.6
TgfaP48030 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.8■□□□□ 0.6
TgfaP48030 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.8■□□□□ 0.6
TgfaP48030 Golgb1-201ENSMUST00000023534 498 ntBASIC18.8■□□□□ 0.6
TgfaP48030 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TgfaP48030 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TgfaP48030 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.79■□□□□ 0.6
TgfaP48030 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TgfaP48030 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TgfaP48030 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TgfaP48030 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TgfaP48030 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.78■□□□□ 0.6
TgfaP48030 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.78■□□□□ 0.6
TgfaP48030 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.78■□□□□ 0.6
TgfaP48030 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TgfaP48030 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TgfaP48030 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TgfaP48030 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TgfaP48030 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.77■□□□□ 0.6
TgfaP48030 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms