Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Vps4bP46467 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.83■■□□□ 1.09
Vps4bP46467 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps4bP46467 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.83■■□□□ 1.08
Vps4bP46467 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.82■■□□□ 1.08
Vps4bP46467 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps4bP46467 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.82■■□□□ 1.08
Vps4bP46467 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vps4bP46467 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps4bP46467 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps4bP46467 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps4bP46467 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps4bP46467 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.81■■□□□ 1.08
Vps4bP46467 Gm11687-201ENSMUST00000118911 886 ntBASIC21.81■■□□□ 1.08
Vps4bP46467 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vps4bP46467 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps4bP46467 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vps4bP46467 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Vps4bP46467 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Vps4bP46467 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps4bP46467 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.8■■□□□ 1.08
Vps4bP46467 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.8■■□□□ 1.08
Vps4bP46467 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Vps4bP46467 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Vps4bP46467 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.79■■□□□ 1.08
Vps4bP46467 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps4bP46467 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Vps4bP46467 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vps4bP46467 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps4bP46467 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps4bP46467 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
Vps4bP46467 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Vps4bP46467 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.78■■□□□ 1.08
Vps4bP46467 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.78■■□□□ 1.08
Vps4bP46467 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps4bP46467 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Vps4bP46467 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Vps4bP46467 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps4bP46467 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps4bP46467 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.77■■□□□ 1.08
Vps4bP46467 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vps4bP46467 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vps4bP46467 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps4bP46467 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps4bP46467 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Vps4bP46467 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vps4bP46467 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps4bP46467 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vps4bP46467 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vps4bP46467 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps4bP46467 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps4bP46467 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps4bP46467 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.75■■□□□ 1.07
Vps4bP46467 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vps4bP46467 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Vps4bP46467 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Vps4bP46467 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.74■■□□□ 1.07
Vps4bP46467 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps4bP46467 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vps4bP46467 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps4bP46467 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.73■■□□□ 1.07
Vps4bP46467 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps4bP46467 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.73■■□□□ 1.07
Vps4bP46467 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps4bP46467 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Vps4bP46467 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Vps4bP46467 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.73■■□□□ 1.07
Vps4bP46467 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps4bP46467 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps4bP46467 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.72■■□□□ 1.07
Vps4bP46467 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.72■■□□□ 1.07
Vps4bP46467 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms