Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd27P41272 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cd27P41272 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd27P41272 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cd27P41272 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd27P41272 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd27P41272 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd27P41272 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.41■□□□□ 0.38
Cd27P41272 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.41■□□□□ 0.38
Cd27P41272 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd27P41272 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cd27P41272 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cd27P41272 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd27P41272 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Cd27P41272 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd27P41272 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.39■□□□□ 0.37
Cd27P41272 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd27P41272 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd27P41272 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd27P41272 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cd27P41272 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cd27P41272 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd27P41272 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.38■□□□□ 0.37
Cd27P41272 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd27P41272 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cd27P41272 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd27P41272 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cd27P41272 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd27P41272 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd27P41272 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd27P41272 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd27P41272 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cd27P41272 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd27P41272 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd27P41272 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd27P41272 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd27P41272 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd27P41272 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd27P41272 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd27P41272 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.35■□□□□ 0.37
Cd27P41272 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.35■□□□□ 0.37
Cd27P41272 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
Cd27P41272 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd27P41272 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd27P41272 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd27P41272 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd27P41272 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd27P41272 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd27P41272 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.33■□□□□ 0.37
Cd27P41272 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd27P41272 Gm13238-201ENSMUST00000117655 780 ntBASIC17.33■□□□□ 0.36
Cd27P41272 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd27P41272 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.33■□□□□ 0.36
Cd27P41272 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd27P41272 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd27P41272 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cd27P41272 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms