Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca1P41233 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca1P41233 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca1P41233 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Abca1P41233 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.8■□□□□ 0.44
Abca1P41233 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abca1P41233 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca1P41233 Gm12922-201ENSMUST00000120626 809 ntBASIC17.79■□□□□ 0.44
Abca1P41233 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca1P41233 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Abca1P41233 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca1P41233 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Abca1P41233 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.79■□□□□ 0.44
Abca1P41233 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.79■□□□□ 0.44
Abca1P41233 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.79■□□□□ 0.44
Abca1P41233 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca1P41233 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Abca1P41233 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Abca1P41233 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca1P41233 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.78■□□□□ 0.44
Abca1P41233 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abca1P41233 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abca1P41233 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Abca1P41233 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Abca1P41233 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.77■□□□□ 0.43
Abca1P41233 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.77■□□□□ 0.43
Abca1P41233 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Abca1P41233 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.76■□□□□ 0.43
Abca1P41233 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Abca1P41233 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.76■□□□□ 0.43
Abca1P41233 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca1P41233 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.76■□□□□ 0.43
Abca1P41233 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca1P41233 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Abca1P41233 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
Abca1P41233 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.75■□□□□ 0.43
Abca1P41233 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca1P41233 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Abca1P41233 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.75■□□□□ 0.43
Abca1P41233 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Abca1P41233 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.74■□□□□ 0.43
Abca1P41233 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Abca1P41233 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.74■□□□□ 0.43
Abca1P41233 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca1P41233 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Abca1P41233 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Abca1P41233 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca1P41233 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca1P41233 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abca1P41233 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.73■□□□□ 0.43
Abca1P41233 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca1P41233 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.72■□□□□ 0.43
Abca1P41233 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Abca1P41233 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca1P41233 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Abca1P41233 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.72■□□□□ 0.43
Abca1P41233 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abca1P41233 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abca1P41233 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.7■□□□□ 0.42
Abca1P41233 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Abca1P41233 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.7■□□□□ 0.42
Abca1P41233 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.7■□□□□ 0.42
Abca1P41233 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca1P41233 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abca1P41233 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Abca1P41233 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abca1P41233 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abca1P41233 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.69■□□□□ 0.42
Abca1P41233 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.69■□□□□ 0.42
Abca1P41233 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Abca1P41233 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca1P41233 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Abca1P41233 Gm22238-201ENSMUST00000175222 88 ntBASIC17.68■□□□□ 0.42
Abca1P41233 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.68■□□□□ 0.42
Abca1P41233 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Abca1P41233 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca1P41233 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca1P41233 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca1P41233 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abca1P41233 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Abca1P41233 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Abca1P41233 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms