Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.09■□□□□ 0.33
Rom1P32958 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rom1P32958 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rom1P32958 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rom1P32958 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rom1P32958 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rom1P32958 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rom1P32958 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rom1P32958 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rom1P32958 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rom1P32958 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.08■□□□□ 0.32
Rom1P32958 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rom1P32958 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.08■□□□□ 0.32
Rom1P32958 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rom1P32958 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rom1P32958 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rom1P32958 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rom1P32958 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rom1P32958 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rom1P32958 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rom1P32958 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rom1P32958 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rom1P32958 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rom1P32958 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Rom1P32958 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rom1P32958 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rom1P32958 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.05■□□□□ 0.32
Rom1P32958 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rom1P32958 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.05■□□□□ 0.32
Rom1P32958 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.05■□□□□ 0.32
Rom1P32958 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rom1P32958 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.04■□□□□ 0.32
Rom1P32958 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.04■□□□□ 0.32
Rom1P32958 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.04■□□□□ 0.32
Rom1P32958 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rom1P32958 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rom1P32958 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.04■□□□□ 0.32
Rom1P32958 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rom1P32958 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.03■□□□□ 0.32
Rom1P32958 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rom1P32958 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rom1P32958 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Notumos-201ENSMUST00000151998 2659 ntBASIC17.03■□□□□ 0.32
Rom1P32958 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rom1P32958 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rom1P32958 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rom1P32958 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rom1P32958 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rom1P32958 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rom1P32958 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rom1P32958 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rom1P32958 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rom1P32958 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rom1P32958 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rom1P32958 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rom1P32958 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.02■□□□□ 0.31
Rom1P32958 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.01■□□□□ 0.31
Rom1P32958 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.01■□□□□ 0.31
Rom1P32958 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.01■□□□□ 0.31
Rom1P32958 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.01■□□□□ 0.31
Rom1P32958 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rom1P32958 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rom1P32958 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rom1P32958 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rom1P32958 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rom1P32958 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rom1P32958 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rom1P32958 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rom1P32958 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.99■□□□□ 0.31
Rom1P32958 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rom1P32958 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rom1P32958 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.98■□□□□ 0.31
Rom1P32958 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rom1P32958 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rom1P32958 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms