Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PdgfbP31240 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PdgfbP31240 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.11■■□□□ 1.13
PdgfbP31240 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PdgfbP31240 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.1■■□□□ 1.13
PdgfbP31240 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.1■■□□□ 1.13
PdgfbP31240 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PdgfbP31240 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PdgfbP31240 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PdgfbP31240 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PdgfbP31240 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PdgfbP31240 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.09■■□□□ 1.13
PdgfbP31240 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.09■■□□□ 1.13
PdgfbP31240 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PdgfbP31240 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.13
PdgfbP31240 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.08■■□□□ 1.13
PdgfbP31240 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PdgfbP31240 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PdgfbP31240 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PdgfbP31240 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PdgfbP31240 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PdgfbP31240 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.07■■□□□ 1.12
PdgfbP31240 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PdgfbP31240 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.07■■□□□ 1.12
PdgfbP31240 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PdgfbP31240 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PdgfbP31240 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PdgfbP31240 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PdgfbP31240 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
PdgfbP31240 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PdgfbP31240 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PdgfbP31240 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.05■■□□□ 1.12
PdgfbP31240 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PdgfbP31240 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PdgfbP31240 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.05■■□□□ 1.12
PdgfbP31240 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.05■■□□□ 1.12
PdgfbP31240 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PdgfbP31240 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PdgfbP31240 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
PdgfbP31240 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PdgfbP31240 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PdgfbP31240 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PdgfbP31240 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PdgfbP31240 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.03■■□□□ 1.12
PdgfbP31240 Gm8495-201ENSMUST00000188740 694 ntBASIC22.03■■□□□ 1.12
PdgfbP31240 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PdgfbP31240 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PdgfbP31240 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.03■■□□□ 1.12
PdgfbP31240 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PdgfbP31240 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PdgfbP31240 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PdgfbP31240 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.02■■□□□ 1.12
PdgfbP31240 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.02■■□□□ 1.12
PdgfbP31240 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PdgfbP31240 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.01■■□□□ 1.11
PdgfbP31240 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PdgfbP31240 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.01■■□□□ 1.11
PdgfbP31240 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PdgfbP31240 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PdgfbP31240 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22■■□□□ 1.11
PdgfbP31240 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PdgfbP31240 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PdgfbP31240 Gm18284-201ENSMUST00000172604 624 ntBASIC21.99■■□□□ 1.11
PdgfbP31240 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PdgfbP31240 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.99■■□□□ 1.11
PdgfbP31240 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PdgfbP31240 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PdgfbP31240 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PdgfbP31240 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PdgfbP31240 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.98■■□□□ 1.11
PdgfbP31240 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PdgfbP31240 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PdgfbP31240 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PdgfbP31240 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PdgfbP31240 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PdgfbP31240 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PdgfbP31240 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.97■■□□□ 1.11
PdgfbP31240 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PdgfbP31240 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PdgfbP31240 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PdgfbP31240 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.95■■□□□ 1.1
PdgfbP31240 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PdgfbP31240 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PdgfbP31240 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PdgfbP31240 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.95■■□□□ 1.1
PdgfbP31240 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PdgfbP31240 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PdgfbP31240 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms