Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.46■■□□□ 1.35
Pde6bP23440 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Pde6bP23440 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
Pde6bP23440 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pde6bP23440 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pde6bP23440 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pde6bP23440 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.45■■□□□ 1.34
Pde6bP23440 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.45■■□□□ 1.34
Pde6bP23440 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pde6bP23440 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.45■■□□□ 1.34
Pde6bP23440 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pde6bP23440 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Pde6bP23440 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pde6bP23440 Gm7417-201ENSMUST00000192950 473 ntBASIC23.44■■□□□ 1.34
Pde6bP23440 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pde6bP23440 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.44■■□□□ 1.34
Pde6bP23440 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.43■■□□□ 1.34
Pde6bP23440 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.43■■□□□ 1.34
Pde6bP23440 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pde6bP23440 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.43■■□□□ 1.34
Pde6bP23440 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pde6bP23440 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pde6bP23440 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.42■■□□□ 1.34
Pde6bP23440 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pde6bP23440 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pde6bP23440 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pde6bP23440 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.41■■□□□ 1.34
Pde6bP23440 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pde6bP23440 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Pde6bP23440 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pde6bP23440 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pde6bP23440 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.4■■□□□ 1.34
Pde6bP23440 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.4■■□□□ 1.34
Pde6bP23440 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pde6bP23440 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Pde6bP23440 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pde6bP23440 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pde6bP23440 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.39■■□□□ 1.33
Pde6bP23440 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pde6bP23440 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.38■■□□□ 1.33
Pde6bP23440 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pde6bP23440 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.38■■□□□ 1.33
Pde6bP23440 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pde6bP23440 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.37■■□□□ 1.33
Pde6bP23440 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pde6bP23440 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pde6bP23440 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pde6bP23440 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.36■■□□□ 1.33
Pde6bP23440 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.36■■□□□ 1.33
Pde6bP23440 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Pde6bP23440 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pde6bP23440 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Pde6bP23440 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.35■■□□□ 1.33
Pde6bP23440 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.35■■□□□ 1.33
Pde6bP23440 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pde6bP23440 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pde6bP23440 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pde6bP23440 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.34■■□□□ 1.33
Pde6bP23440 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pde6bP23440 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pde6bP23440 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Pde6bP23440 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Pde6bP23440 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.33■■□□□ 1.33
Pde6bP23440 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Pde6bP23440 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.33■■□□□ 1.33
Pde6bP23440 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pde6bP23440 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pde6bP23440 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pde6bP23440 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pde6bP23440 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.32■■□□□ 1.32
Pde6bP23440 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
Pde6bP23440 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pde6bP23440 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pde6bP23440 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Pde6bP23440 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pde6bP23440 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms