Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a2O88627 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a2O88627 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.08■□□□□ 0.65
Slc28a2O88627 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc28a2O88627 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc28a2O88627 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Slc28a2O88627 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a2O88627 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.08■□□□□ 0.64
Slc28a2O88627 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.07■□□□□ 0.64
Slc28a2O88627 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a2O88627 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a2O88627 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a2O88627 Scarna2-201ENSMUST00000157560 414 ntBASIC19.07■□□□□ 0.64
Slc28a2O88627 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.07■□□□□ 0.64
Slc28a2O88627 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a2O88627 Gm9806-201ENSMUST00000051080 552 ntBASIC19.07■□□□□ 0.64
Slc28a2O88627 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a2O88627 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a2O88627 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a2O88627 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a2O88627 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Slc28a2O88627 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a2O88627 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a2O88627 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a2O88627 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Slc28a2O88627 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc28a2O88627 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc28a2O88627 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc28a2O88627 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc28a2O88627 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc28a2O88627 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc28a2O88627 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc28a2O88627 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc28a2O88627 Gm11687-201ENSMUST00000118911 886 ntBASIC19.03■□□□□ 0.64
Slc28a2O88627 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc28a2O88627 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc28a2O88627 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc28a2O88627 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc28a2O88627 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc28a2O88627 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc28a2O88627 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc28a2O88627 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc28a2O88627 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc28a2O88627 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc28a2O88627 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Slc28a2O88627 Gm16437-201ENSMUST00000025669 507 ntBASIC19.02■□□□□ 0.64
Slc28a2O88627 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Slc28a2O88627 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc28a2O88627 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc28a2O88627 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Slc28a2O88627 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc28a2O88627 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.01■□□□□ 0.63
Slc28a2O88627 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slc28a2O88627 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Slc28a2O88627 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc28a2O88627 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc28a2O88627 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc28a2O88627 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slc28a2O88627 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc28a2O88627 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19■□□□□ 0.63
Slc28a2O88627 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc28a2O88627 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19■□□□□ 0.63
Slc28a2O88627 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc28a2O88627 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc28a2O88627 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc28a2O88627 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc28a2O88627 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc28a2O88627 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Slc28a2O88627 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc28a2O88627 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.98■□□□□ 0.63
Slc28a2O88627 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc28a2O88627 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc28a2O88627 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Slc28a2O88627 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc28a2O88627 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc28a2O88627 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Slc28a2O88627 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc28a2O88627 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc28a2O88627 Gm44428-201ENSMUST00000204474 874 ntBASIC18.96■□□□□ 0.63
Slc28a2O88627 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc28a2O88627 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms