Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.45■□□□□ 0.54
Cldn1O88551 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn1O88551 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn1O88551 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn1O88551 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn1O88551 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn1O88551 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn1O88551 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cldn1O88551 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn1O88551 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn1O88551 Gm22238-201ENSMUST00000175222 88 ntBASIC18.44■□□□□ 0.54
Cldn1O88551 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.43■□□□□ 0.54
Cldn1O88551 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn1O88551 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cldn1O88551 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldn1O88551 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn1O88551 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldn1O88551 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.42■□□□□ 0.54
Cldn1O88551 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn1O88551 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cldn1O88551 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cldn1O88551 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn1O88551 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.41■□□□□ 0.54
Cldn1O88551 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn1O88551 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn1O88551 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.41■□□□□ 0.54
Cldn1O88551 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.4■□□□□ 0.54
Cldn1O88551 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.4■□□□□ 0.54
Cldn1O88551 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.4■□□□□ 0.54
Cldn1O88551 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn1O88551 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn1O88551 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.39■□□□□ 0.53
Cldn1O88551 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn1O88551 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn1O88551 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn1O88551 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn1O88551 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Cldn1O88551 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cldn1O88551 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn1O88551 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn1O88551 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.36■□□□□ 0.53
Cldn1O88551 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn1O88551 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.35■□□□□ 0.53
Cldn1O88551 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn1O88551 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cldn1O88551 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.35■□□□□ 0.53
Cldn1O88551 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.35■□□□□ 0.53
Cldn1O88551 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn1O88551 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cldn1O88551 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Cldn1O88551 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cldn1O88551 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn1O88551 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn1O88551 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn1O88551 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn1O88551 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn1O88551 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.34■□□□□ 0.53
Cldn1O88551 Gm40881-201ENSMUST00000223397 166 ntBASIC18.34■□□□□ 0.53
Cldn1O88551 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.34■□□□□ 0.53
Cldn1O88551 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cldn1O88551 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cldn1O88551 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.33■□□□□ 0.52
Cldn1O88551 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cldn1O88551 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn1O88551 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn1O88551 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn1O88551 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.32■□□□□ 0.52
Cldn1O88551 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.32■□□□□ 0.52
Cldn1O88551 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn1O88551 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.32■□□□□ 0.52
Cldn1O88551 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cldn1O88551 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn1O88551 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn1O88551 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn1O88551 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cldn1O88551 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn1O88551 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn1O88551 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn1O88551 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn1O88551 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn1O88551 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.29■□□□□ 0.52
Cldn1O88551 Gm12922-201ENSMUST00000120626 809 ntBASIC18.29■□□□□ 0.52
Cldn1O88551 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.29■□□□□ 0.52
Cldn1O88551 Gm27454-201ENSMUST00000185090 204 ntBASIC18.29■□□□□ 0.52
Cldn1O88551 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.29■□□□□ 0.52
Cldn1O88551 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.29■□□□□ 0.52
Cldn1O88551 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms