Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.07■■□□□ 1.28
Ttc3O88196 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ttc3O88196 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.07■■□□□ 1.28
Ttc3O88196 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.05■■□□□ 1.28
Ttc3O88196 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.05■■□□□ 1.28
Ttc3O88196 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ttc3O88196 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.04■■□□□ 1.28
Ttc3O88196 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ttc3O88196 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.03■■□□□ 1.28
Ttc3O88196 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc3O88196 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ttc3O88196 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ttc3O88196 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
Ttc3O88196 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.01■■□□□ 1.27
Ttc3O88196 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ttc3O88196 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23■■□□□ 1.27
Ttc3O88196 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ttc3O88196 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Gm15039-201ENSMUST00000118914 875 ntBASIC22.98■■□□□ 1.27
Ttc3O88196 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.98■■□□□ 1.27
Ttc3O88196 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Ttc3O88196 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ttc3O88196 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.97■■□□□ 1.27
Ttc3O88196 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
Ttc3O88196 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.95■■□□□ 1.26
Ttc3O88196 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ttc3O88196 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Ttc3O88196 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.94■■□□□ 1.26
Ttc3O88196 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.94■■□□□ 1.26
Ttc3O88196 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.93■■□□□ 1.26
Ttc3O88196 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.92■■□□□ 1.26
Ttc3O88196 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Ttc3O88196 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms