Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.07■■□□□ 1.28
Ttc3O88196 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ttc3O88196 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.07■■□□□ 1.28
Ttc3O88196 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc3O88196 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.05■■□□□ 1.28
Ttc3O88196 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.05■■□□□ 1.28
Ttc3O88196 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc3O88196 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ttc3O88196 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.04■■□□□ 1.28
Ttc3O88196 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ttc3O88196 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ttc3O88196 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.03■■□□□ 1.28
Ttc3O88196 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc3O88196 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ttc3O88196 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ttc3O88196 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
Ttc3O88196 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc3O88196 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.01■■□□□ 1.27
Ttc3O88196 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ttc3O88196 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23■■□□□ 1.27
Ttc3O88196 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ttc3O88196 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc3O88196 Gm15039-201ENSMUST00000118914 875 ntBASIC22.98■■□□□ 1.27
Ttc3O88196 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.98■■□□□ 1.27
Ttc3O88196 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Ttc3O88196 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc3O88196 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ttc3O88196 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.97■■□□□ 1.27
Ttc3O88196 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc3O88196 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc3O88196 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc3O88196 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
Ttc3O88196 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.95■■□□□ 1.26
Ttc3O88196 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ttc3O88196 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ttc3O88196 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Ttc3O88196 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.94■■□□□ 1.26
Ttc3O88196 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.94■■□□□ 1.26
Ttc3O88196 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.94■■□□□ 1.26
Ttc3O88196 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ttc3O88196 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.93■■□□□ 1.26
Ttc3O88196 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.93■■□□□ 1.26
Ttc3O88196 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ttc3O88196 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.92■■□□□ 1.26
Ttc3O88196 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Ttc3O88196 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ttc3O88196 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms