Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.03■□□□□ 0.32
Pde6dO55057 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.03■□□□□ 0.32
Pde6dO55057 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6dO55057 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6dO55057 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.02■□□□□ 0.32
Pde6dO55057 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6dO55057 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6dO55057 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6dO55057 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6dO55057 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pde6dO55057 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Gm24970-201ENSMUST00000175582 82 ntBASIC17.01■□□□□ 0.31
Pde6dO55057 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6dO55057 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pde6dO55057 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pde6dO55057 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17■□□□□ 0.31
Pde6dO55057 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6dO55057 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pde6dO55057 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17■□□□□ 0.31
Pde6dO55057 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pde6dO55057 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6dO55057 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pde6dO55057 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pde6dO55057 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pde6dO55057 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.98■□□□□ 0.31
Pde6dO55057 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6dO55057 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6dO55057 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pde6dO55057 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6dO55057 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pde6dO55057 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pde6dO55057 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6dO55057 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6dO55057 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pde6dO55057 Gm37136-201ENSMUST00000194368 194 ntBASIC16.96■□□□□ 0.31
Pde6dO55057 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6dO55057 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.96■□□□□ 0.31
Pde6dO55057 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pde6dO55057 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6dO55057 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6dO55057 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6dO55057 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Pde6dO55057 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.95■□□□□ 0.3
Pde6dO55057 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pde6dO55057 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pde6dO55057 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6dO55057 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.94■□□□□ 0.3
Pde6dO55057 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6dO55057 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6dO55057 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pde6dO55057 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6dO55057 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.93■□□□□ 0.3
Pde6dO55057 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pde6dO55057 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pde6dO55057 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6dO55057 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pde6dO55057 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pde6dO55057 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pde6dO55057 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6dO55057 Zfp131-205ENSMUST00000223812 663 ntBASIC16.92■□□□□ 0.3
Pde6dO55057 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms