Protein–RNA interactions for Protein: O09102

Gcm2, Chorion-specific transcription factor GCMb, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm2O09102 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gcm2O09102 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.38■■□□□ 1.01
Gcm2O09102 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gcm2O09102 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gcm2O09102 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gcm2O09102 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gcm2O09102 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gcm2O09102 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gcm2O09102 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.36■■□□□ 1.01
Gcm2O09102 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.36■■□□□ 1.01
Gcm2O09102 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Gcm2O09102 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gcm2O09102 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gcm2O09102 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gcm2O09102 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.35■■□□□ 1.01
Gcm2O09102 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Gcm2O09102 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gcm2O09102 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gcm2O09102 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gcm2O09102 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gcm2O09102 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gcm2O09102 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.34■■□□□ 1.01
Gcm2O09102 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gcm2O09102 Etf1-202ENSMUST00000180351 108 ntBASIC21.34■■□□□ 1.01
Gcm2O09102 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gcm2O09102 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Gcm2O09102 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gcm2O09102 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Gcm2O09102 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gcm2O09102 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gcm2O09102 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.32■■□□□ 1
Gcm2O09102 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gcm2O09102 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gcm2O09102 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gcm2O09102 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gcm2O09102 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Gcm2O09102 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gcm2O09102 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gcm2O09102 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.31■■□□□ 1
Gcm2O09102 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.31■■□□□ 1
Gcm2O09102 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gcm2O09102 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gcm2O09102 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gcm2O09102 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gcm2O09102 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.3■■□□□ 1
Gcm2O09102 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.29■■□□□ 1
Gcm2O09102 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gcm2O09102 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.28■■□□□ 1
Gcm2O09102 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.28■■□□□ 1
Gcm2O09102 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.28■■□□□ 1
Gcm2O09102 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.28■■□□□ 1
Gcm2O09102 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm2O09102 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gcm2O09102 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gcm2O09102 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gcm2O09102 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Gcm2O09102 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.27■■□□□ 1
Gcm2O09102 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.27■■□□□ 1
Gcm2O09102 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gcm2O09102 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Gcm2O09102 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.26■□□□□ 0.99
Gcm2O09102 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Gcm2O09102 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm2O09102 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gcm2O09102 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.25■□□□□ 0.99
Gcm2O09102 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gcm2O09102 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.25■□□□□ 0.99
Gcm2O09102 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gcm2O09102 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.24■□□□□ 0.99
Gcm2O09102 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gcm2O09102 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.24■□□□□ 0.99
Gcm2O09102 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.24■□□□□ 0.99
Gcm2O09102 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gcm2O09102 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gcm2O09102 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gcm2O09102 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gcm2O09102 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms