Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa8J3QNX5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.64■□□□□ 0.73
Shisa8J3QNX5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa8J3QNX5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Gm22567-201ENSMUST00000175542 342 ntBASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shisa8J3QNX5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 Gm9812-201ENSMUST00000061934 968 ntBASIC19.62■□□□□ 0.73
Shisa8J3QNX5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Shisa8J3QNX5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.61■□□□□ 0.73
Shisa8J3QNX5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.61■□□□□ 0.73
Shisa8J3QNX5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.61■□□□□ 0.73
Shisa8J3QNX5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.6■□□□□ 0.73
Shisa8J3QNX5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.6■□□□□ 0.73
Shisa8J3QNX5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa8J3QNX5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa8J3QNX5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa8J3QNX5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa8J3QNX5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa8J3QNX5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
Shisa8J3QNX5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.59■□□□□ 0.73
Shisa8J3QNX5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa8J3QNX5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Shisa8J3QNX5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa8J3QNX5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa8J3QNX5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa8J3QNX5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Shisa8J3QNX5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Shisa8J3QNX5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa8J3QNX5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa8J3QNX5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa8J3QNX5 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.57■□□□□ 0.72
Shisa8J3QNX5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Shisa8J3QNX5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa8J3QNX5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa8J3QNX5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa8J3QNX5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa8J3QNX5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa8J3QNX5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa8J3QNX5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa8J3QNX5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Shisa8J3QNX5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Mir3960-201ENSMUST00000198213 73 ntBASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Gm45364-201ENSMUST00000210883 159 ntBASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Terc-201ENSMUST00000082862 423 ntBASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Notumos-201ENSMUST00000151998 2659 ntBASIC19.54■□□□□ 0.72
Shisa8J3QNX5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.54■□□□□ 0.72
Shisa8J3QNX5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa8J3QNX5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Shisa8J3QNX5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shisa8J3QNX5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shisa8J3QNX5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa8J3QNX5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms