Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cpsf4lE9Q2N0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf4lE9Q2N0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf4lE9Q2N0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.33■□□□□ 0.52
Cpsf4lE9Q2N0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.33■□□□□ 0.52
Cpsf4lE9Q2N0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf4lE9Q2N0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf4lE9Q2N0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf4lE9Q2N0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf4lE9Q2N0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf4lE9Q2N0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4lE9Q2N0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4lE9Q2N0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4lE9Q2N0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf4lE9Q2N0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4lE9Q2N0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.27■□□□□ 0.51
Cpsf4lE9Q2N0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf4lE9Q2N0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.27■□□□□ 0.51
Cpsf4lE9Q2N0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4lE9Q2N0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf4lE9Q2N0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4lE9Q2N0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms