Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3543D3Z235 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3543D3Z235 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3543D3Z235 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3543D3Z235 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3543D3Z235 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3543D3Z235 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3543D3Z235 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3543D3Z235 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3543D3Z235 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3543D3Z235 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3543D3Z235 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3543D3Z235 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3543D3Z235 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3543D3Z235 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gm3543D3Z235 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3543D3Z235 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3543D3Z235 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3543D3Z235 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.37■□□□□ 0.69
Gm3543D3Z235 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3543D3Z235 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3543D3Z235 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3543D3Z235 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3543D3Z235 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm3543D3Z235 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.33■□□□□ 0.69
Gm3543D3Z235 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3543D3Z235 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm3543D3Z235 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm3543D3Z235 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3543D3Z235 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3543D3Z235 Gm5812-201ENSMUST00000061073 957 ntBASIC19.33■□□□□ 0.68
Gm3543D3Z235 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3543D3Z235 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3543D3Z235 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3543D3Z235 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms