Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip3B9EHT4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clip3B9EHT4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Clip3B9EHT4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip3B9EHT4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Gm13238-201ENSMUST00000117655 780 ntBASIC20.67■□□□□ 0.9
Clip3B9EHT4 Gm5812-201ENSMUST00000061073 957 ntBASIC20.67■□□□□ 0.9
Clip3B9EHT4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clip3B9EHT4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
Clip3B9EHT4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clip3B9EHT4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.66■□□□□ 0.9
Clip3B9EHT4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clip3B9EHT4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip3B9EHT4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip3B9EHT4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clip3B9EHT4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip3B9EHT4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip3B9EHT4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clip3B9EHT4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.64■□□□□ 0.9
Clip3B9EHT4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Clip3B9EHT4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clip3B9EHT4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clip3B9EHT4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clip3B9EHT4 Gm45444-201ENSMUST00000211394 898 ntBASIC20.64■□□□□ 0.89
Clip3B9EHT4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip3B9EHT4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clip3B9EHT4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip3B9EHT4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Clip3B9EHT4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip3B9EHT4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.62■□□□□ 0.89
Clip3B9EHT4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip3B9EHT4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clip3B9EHT4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Gm15546-201ENSMUST00000122095 826 ntBASIC20.6■□□□□ 0.89
Clip3B9EHT4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Gm15820-201ENSMUST00000201566 728 ntBASIC20.6■□□□□ 0.89
Clip3B9EHT4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clip3B9EHT4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Gm43566-201ENSMUST00000196851 808 ntBASIC20.59■□□□□ 0.89
Clip3B9EHT4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip3B9EHT4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip3B9EHT4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip3B9EHT4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clip3B9EHT4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip3B9EHT4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.57■□□□□ 0.88
Clip3B9EHT4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clip3B9EHT4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.57■□□□□ 0.88
Clip3B9EHT4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip3B9EHT4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip3B9EHT4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms