Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim17A0A504 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smim17A0A504 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smim17A0A504 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim17A0A504 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Smim17A0A504 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smim17A0A504 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smim17A0A504 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smim17A0A504 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smim17A0A504 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smim17A0A504 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smim17A0A504 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smim17A0A504 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim17A0A504 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smim17A0A504 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim17A0A504 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim17A0A504 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Smim17A0A504 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smim17A0A504 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim17A0A504 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smim17A0A504 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smim17A0A504 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smim17A0A504 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smim17A0A504 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smim17A0A504 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smim17A0A504 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim17A0A504 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Smim17A0A504 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim17A0A504 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smim17A0A504 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smim17A0A504 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim17A0A504 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smim17A0A504 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smim17A0A504 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.53■□□□□ 0.72
Smim17A0A504 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim17A0A504 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim17A0A504 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smim17A0A504 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Smim17A0A504 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smim17A0A504 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.53■□□□□ 0.72
Smim17A0A504 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim17A0A504 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smim17A0A504 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.52■□□□□ 0.72
Smim17A0A504 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smim17A0A504 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smim17A0A504 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.51■□□□□ 0.71
Smim17A0A504 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.51■□□□□ 0.71
Smim17A0A504 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim17A0A504 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim17A0A504 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smim17A0A504 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim17A0A504 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim17A0A504 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim17A0A504 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smim17A0A504 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.49■□□□□ 0.71
Smim17A0A504 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim17A0A504 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim17A0A504 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim17A0A504 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim17A0A504 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.48■□□□□ 0.71
Smim17A0A504 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smim17A0A504 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.48■□□□□ 0.71
Smim17A0A504 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim17A0A504 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim17A0A504 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smim17A0A504 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim17A0A504 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim17A0A504 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smim17A0A504 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim17A0A504 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim17A0A504 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Smim17A0A504 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smim17A0A504 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smim17A0A504 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim17A0A504 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim17A0A504 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms