Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.96■□□□□ 0.46
Lnp1A0A1B0GSK3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lnp1A0A1B0GSK3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Lnp1A0A1B0GSK3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Gm22567-201ENSMUST00000175542 342 ntBASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.93■□□□□ 0.46
Lnp1A0A1B0GSK3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lnp1A0A1B0GSK3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lnp1A0A1B0GSK3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lnp1A0A1B0GSK3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Lnp1A0A1B0GSK3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Lnp1A0A1B0GSK3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lnp1A0A1B0GSK3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lnp1A0A1B0GSK3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Lnp1A0A1B0GSK3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Cap2-205ENSMUST00000225824 1634 ntBASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lnp1A0A1B0GSK3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lnp1A0A1B0GSK3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lnp1A0A1B0GSK3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms