Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.44■□□□□ 0.22
Trbv17A0A140T8P8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv17A0A140T8P8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trbv17A0A140T8P8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv17A0A140T8P8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv17A0A140T8P8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv17A0A140T8P8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Cap2-205ENSMUST00000225824 1634 ntBASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv17A0A140T8P8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trbv17A0A140T8P8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv17A0A140T8P8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv17A0A140T8P8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv17A0A140T8P8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv17A0A140T8P8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms