Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav23A0A0G2JG17 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav23A0A0G2JG17 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav23A0A0G2JG17 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav23A0A0G2JG17 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav23A0A0G2JG17 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav23A0A0G2JG17 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav23A0A0G2JG17 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav23A0A0G2JG17 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav23A0A0G2JG17 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav23A0A0G2JG17 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav23A0A0G2JG17 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav23A0A0G2JG17 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav23A0A0G2JG17 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav23A0A0G2JG17 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav23A0A0G2JG17 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav23A0A0G2JG17 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav23A0A0G2JG17 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav23A0A0G2JG17 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav23A0A0G2JG17 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav23A0A0G2JG17 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav23A0A0G2JG17 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav23A0A0G2JG17 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav23A0A0G2JG17 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav23A0A0G2JG17 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms