Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv26A0A0B4J1P5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv26A0A0B4J1P5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv26A0A0B4J1P5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv26A0A0B4J1P5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv26A0A0B4J1P5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv26A0A0B4J1P5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Trbv26A0A0B4J1P5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv26A0A0B4J1P5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv26A0A0B4J1P5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv26A0A0B4J1P5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv26A0A0B4J1P5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv26A0A0B4J1P5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv26A0A0B4J1P5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv26A0A0B4J1P5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv26A0A0B4J1P5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Gm22567-201ENSMUST00000175542 342 ntBASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Gm5921-201ENSMUST00000075898 882 ntBASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv26A0A0B4J1P5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv26A0A0B4J1P5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv26A0A0B4J1P5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trbv26A0A0B4J1P5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv26A0A0B4J1P5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trbv26A0A0B4J1P5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv26A0A0B4J1P5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.83■□□□□ 0.44
Trbv26A0A0B4J1P5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv26A0A0B4J1P5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.83■□□□□ 0.44
Trbv26A0A0B4J1P5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv26A0A0B4J1P5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trbv26A0A0B4J1P5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv26A0A0B4J1P5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv26A0A0B4J1P5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv26A0A0B4J1P5 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.82■□□□□ 0.44
Trbv26A0A0B4J1P5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv26A0A0B4J1P5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms