Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Gm6821-201ENSMUST00000107540 542 ntBASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-2A0A075B649 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-2A0A075B649 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-2A0A075B649 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Gm4799-201ENSMUST00000095396 657 ntBASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-2A0A075B649 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-2A0A075B649 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-2A0A075B649 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-2A0A075B649 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-2A0A075B649 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav13-2A0A075B649 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.34□□□□□ -0.11
Trav13-2A0A075B649 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13-2A0A075B649 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13-2A0A075B649 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-2A0A075B649 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-2A0A075B649 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav13-2A0A075B649 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav13-2A0A075B649 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms