Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8n-2A0A075B633 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8n-2A0A075B633 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Gm12922-201ENSMUST00000120626 809 ntBASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8n-2A0A075B633 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Trav8n-2A0A075B633 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav8n-2A0A075B633 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav8n-2A0A075B633 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav8n-2A0A075B633 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav8n-2A0A075B633 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav8n-2A0A075B633 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8n-2A0A075B633 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8n-2A0A075B633 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.93■□□□□ 0.78
Trav8n-2A0A075B633 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav8n-2A0A075B633 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav8n-2A0A075B633 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Gm21956-201ENSMUST00000179946 522 ntBASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8n-2A0A075B633 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8n-2A0A075B633 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8n-2A0A075B633 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.89■□□□□ 0.77
Trav8n-2A0A075B633 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8n-2A0A075B633 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8n-2A0A075B633 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8n-2A0A075B633 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8n-2A0A075B633 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8n-2A0A075B633 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Gm12821-201ENSMUST00000120022 600 ntBASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8n-2A0A075B633 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8n-2A0A075B633 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8n-2A0A075B633 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav8n-2A0A075B633 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav8n-2A0A075B633 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trav8n-2A0A075B633 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8n-2A0A075B633 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Trav8n-2A0A075B633 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8n-2A0A075B633 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
Trav8n-2A0A075B633 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.83■□□□□ 0.77
Trav8n-2A0A075B633 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.83■□□□□ 0.76
Trav8n-2A0A075B633 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.83■□□□□ 0.76
Trav8n-2A0A075B633 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms